STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_3722Nicotinamidase-like amidase. (196 aa)    
Predicted Functional Partners:
RMCC_2862
Nicotinamidase-like amidase.
  
  
  0.815
RMCC_3723
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein.
 
     0.812
RMCC_3721
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  0.753
RMCC_0062
Isochorismate synthase.
     
 0.738
RMCC_3724
BadM/Rrf2 family transcriptional regulator.
       0.724
RMCC_0226
Urea amidolyase.
    
  0.715
RMCC_0739
Probable hydrolase protein.
  
     0.674
RMCC_4766
Short-chain dehydrogenase.
  
  0.537
RMCC_5479
Rhamnulose-1-phosphate aldolase.
  
  0.522
RMCC_2831
Short chain dehydrogenase.
  
  0.520
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.