STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_3789Uncharacterized protein. (158 aa)    
Predicted Functional Partners:
RMCC_3788
Anti-anti-sigma factor Rsfb.
 
 0.987
RMCC_3972
Anti-anti-sigma factor.
 
 0.964
rsfB
Anti-anti-sigma factor Rsfb; Belongs to the anti-sigma-factor antagonist family.
 
 0.949
RMCC_3792
Response regulator receiver modulated serine phosphatase.
 
 0.915
RMCC_1942
Uncharacterized protein.
 
 0.899
RMCC_4345
Uncharacterized protein.
 
 0.878
RMCC_3973
Bacteriophytochrome.
  
 0.873
RMCC_0476
STAS domain-containing protein.
  
 0.858
RMCC_3328
Anti-sigma factor antagonist.
  
 0.858
RMCC_3785
Anti-anti-sigma regulatory factor.
  
 0.858
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.