Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCC_3909 | RMCC_3910 | Transposase. | Membrane family protein, precursor. | 0.533 |
RMCC_3909 | RMCC_3911 | Transposase. | Transmembrane transport protein MmpL. | 0.538 |
RMCC_3909 | RMCC_3912 | Transposase. | Rhodanese domain-containing protein. | 0.543 |
RMCC_3909 | RMCC_3913 | Transposase. | Transposase. | 0.410 |
RMCC_3910 | RMCC_3909 | Membrane family protein, precursor. | Transposase. | 0.533 |
RMCC_3910 | RMCC_3911 | Membrane family protein, precursor. | Transmembrane transport protein MmpL. | 0.845 |
RMCC_3910 | RMCC_3912 | Membrane family protein, precursor. | Rhodanese domain-containing protein. | 0.773 |
RMCC_3910 | RMCC_3913 | Membrane family protein, precursor. | Transposase. | 0.565 |
RMCC_3911 | RMCC_3909 | Transmembrane transport protein MmpL. | Transposase. | 0.538 |
RMCC_3911 | RMCC_3910 | Transmembrane transport protein MmpL. | Membrane family protein, precursor. | 0.845 |
RMCC_3911 | RMCC_3912 | Transmembrane transport protein MmpL. | Rhodanese domain-containing protein. | 0.773 |
RMCC_3911 | RMCC_3913 | Transmembrane transport protein MmpL. | Transposase. | 0.569 |
RMCC_3912 | RMCC_3909 | Rhodanese domain-containing protein. | Transposase. | 0.543 |
RMCC_3912 | RMCC_3910 | Rhodanese domain-containing protein. | Membrane family protein, precursor. | 0.773 |
RMCC_3912 | RMCC_3911 | Rhodanese domain-containing protein. | Transmembrane transport protein MmpL. | 0.773 |
RMCC_3912 | RMCC_3913 | Rhodanese domain-containing protein. | Transposase. | 0.626 |
RMCC_3913 | RMCC_3909 | Transposase. | Transposase. | 0.410 |
RMCC_3913 | RMCC_3910 | Transposase. | Membrane family protein, precursor. | 0.565 |
RMCC_3913 | RMCC_3911 | Transposase. | Transmembrane transport protein MmpL. | 0.569 |
RMCC_3913 | RMCC_3912 | Transposase. | Rhodanese domain-containing protein. | 0.626 |