STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4019Permease, glycerol uptake facilitator; Belongs to the MIP/aquaporin (TC 1.A.8) family. (233 aa)    
Predicted Functional Partners:
RMCC_2511
Glycerol kinase; Belongs to the FGGY kinase family.
  
 0.802
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 0.802
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 
 0.700
RMCC_4703
Nucleoside diphosphate kinase; Belongs to the NDK family.
  
 
 0.700
RMCC_2854
Transmembrane protein.
   
 0.681
RMCC_3013
Serine/threonine protein phosphatase.
    
   0.681
RMCC_5547
Serine/threonine phosphatase ppp.
    
   0.681
RMCC_4251
Two-component sensor histidine kinase.
   
 0.675
RMCC_4032
Glycerol-3-phosphate dehydrogenase glpD1; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.596
RMCC_6047
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.596
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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