Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RMCC_4021 | RMCC_4022 | RMCC_4021 | RMCC_4022 | Peroxiredoxin ahpE. | Protein of unknown function. | 0.852 |
RMCC_4021 | RMCC_4023 | RMCC_4021 | RMCC_4023 | Peroxiredoxin ahpE. | Uncharacterized protein. | 0.749 |
RMCC_4021 | aceE | RMCC_4021 | RMCC_4024 | Peroxiredoxin ahpE. | Pyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.429 |
RMCC_4022 | RMCC_4021 | RMCC_4022 | RMCC_4021 | Protein of unknown function. | Peroxiredoxin ahpE. | 0.852 |
RMCC_4022 | RMCC_4023 | RMCC_4022 | RMCC_4023 | Protein of unknown function. | Uncharacterized protein. | 0.888 |
RMCC_4022 | RMCC_4025 | RMCC_4022 | RMCC_4025 | Protein of unknown function. | Regulator of polyketide synthase expression. | 0.462 |
RMCC_4022 | RMCC_4819 | RMCC_4022 | RMCC_4819 | Protein of unknown function. | Glycoside hydrolase, family 76. | 0.560 |
RMCC_4022 | aceE | RMCC_4022 | RMCC_4024 | Protein of unknown function. | Pyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.553 |
RMCC_4023 | RMCC_4021 | RMCC_4023 | RMCC_4021 | Uncharacterized protein. | Peroxiredoxin ahpE. | 0.749 |
RMCC_4023 | RMCC_4022 | RMCC_4023 | RMCC_4022 | Uncharacterized protein. | Protein of unknown function. | 0.888 |
RMCC_4023 | RMCC_4025 | RMCC_4023 | RMCC_4025 | Uncharacterized protein. | Regulator of polyketide synthase expression. | 0.457 |
RMCC_4023 | RMCC_4819 | RMCC_4023 | RMCC_4819 | Uncharacterized protein. | Glycoside hydrolase, family 76. | 0.443 |
RMCC_4023 | aceE | RMCC_4023 | RMCC_4024 | Uncharacterized protein. | Pyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.657 |
RMCC_4023 | obg | RMCC_4023 | RMCC_3394 | Uncharacterized protein. | GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.445 |
RMCC_4023 | rsfB | RMCC_4023 | RMCC_0599 | Uncharacterized protein. | Anti-anti-sigma factor Rsfb; Belongs to the anti-sigma-factor antagonist family. | 0.454 |
RMCC_4025 | RMCC_4022 | RMCC_4025 | RMCC_4022 | Regulator of polyketide synthase expression. | Protein of unknown function. | 0.462 |
RMCC_4025 | RMCC_4023 | RMCC_4025 | RMCC_4023 | Regulator of polyketide synthase expression. | Uncharacterized protein. | 0.457 |
RMCC_4025 | aceE | RMCC_4025 | RMCC_4024 | Regulator of polyketide synthase expression. | Pyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.638 |
RMCC_4819 | RMCC_4022 | RMCC_4819 | RMCC_4022 | Glycoside hydrolase, family 76. | Protein of unknown function. | 0.560 |
RMCC_4819 | RMCC_4023 | RMCC_4819 | RMCC_4023 | Glycoside hydrolase, family 76. | Uncharacterized protein. | 0.443 |
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