STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4065Hemerythrin HHE cation binding region. (194 aa)    
Predicted Functional Partners:
RMCC_0653
Nitrite reductase NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.794
RMCC_0696
Ferredoxin reductase.
  
 0.794
RMCC_2840
Reductase.
  
 0.794
RMCC_3065
Nitrite reductase (NAD(P)H) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.794
RMCC_4123
Ferredoxin reductase.
  
 0.794
RMCC_4303
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 0.794
RMCC_3907
NAD(FAD)-dependent dehydrogenase.
  
 0.787
RMCC_4217
Putative pyridine nucleotide-disulphide oxidoreductase.
  
 0.787
gltB
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.741
RMCC_6293
Ferredoxin-dependent glutamate synthase [NADPH] large subunit gltB.
  
 
 0.741
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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