STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4103Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase. (272 aa)    
Predicted Functional Partners:
RMCC_1288
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.760
RMCC_6799
Methylmalonate-semialdehyde dehydrogenase.
  
 
  0.734
RMCC_0967
acyl-CoA oxidase.
   
 
  0.724
RMCC_4600
3-hydroxyisobutyrate dehydrogenase related beta- hydroxyacid dehydrogenase.
  
  
 
0.723
RMCC_3993
Acetyl-/propionyl-coenzyme A carboxylase subunit alpha.
  
 
  0.712
RMCC_5980
Bifunctional protein acetyl-/propionyl-coenzyme A carboxylase alpha subunit accA3: biotin carboxylase + biotin carboxyl carrier protein.
  
 
  0.712
RMCC_6033
Piperideine-6-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
  0.710
RMCC_4256
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
  
  
 
0.697
RMCC_6805
Aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 
  0.697
iolA
Methylmalonate-semialdehyde dehydrogenase.
 
 
  0.696
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.