Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RMCC_4151ABC transporter ATP-binding protein. (362 aa)    
Predicted Functional Partners:
RMCC_1539
Organic solvent resistance ABC transporter permease.
 
 0.993
RMCC_4912
ABC-type transport system, resistance to organic solvents, permease component.
 
 0.993
RMCC_4913
ABC-type transport system, resistance to organic solvents, permease component.
 
 0.993
RMCC_6729
ABC-type transport system, resistance to organic solvents, permease component.
 
 0.993
RMCC_1540
Organic solvent resistance ABC transporter permease.
 
 0.992
RMCC_6730
ABC-type transport system, resistance to organic solvents, permease component.
 
 0.992
RMCC_6726
Virulence factor Mce family protein.
 
  0.958
RMCC_3251
Virulence factor Mce family protein.
 
 0.949
RMCC_4915
Virulence factor Mce family protein.
 
  0.949
RMCC_4918
Virulence factor Mce family protein.
 
 0.949
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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