STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4215Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (222 aa)    
Predicted Functional Partners:
RMCC_4214
Arsenical-resistance protein.
  
 0.986
RMCC_4213
ArsR family transcriptional regulator.
 
  
 0.874
RMCC_0120
Zn-dependent hydrolase.
   
   0.754
RMCC_3908
Beta-lactamase domain-containing protein.
   
   0.754
RMCC_4216
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
    
0.741
RMCC_2588
Thioredoxin.
  
 
 0.697
RMCC_0285
Arsenite-activated ATPase ArsA.
    
 0.696
RMCC_1145
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.678
RMCC_3559
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.678
RMCC_3906
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.678
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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