STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4252F420-dependent methylene-tetrahydromethanopterin reductase. (285 aa)    
Predicted Functional Partners:
RMCC_1999
NADPH-dependent FMN reductase.
  
 0.757
RMCC_4253
F420-dependent methylene-tetrahydromethanopterin reductase.
 
    
0.742
RMCC_3944
DsbA oxidoreductase.
   
    0.664
RMCC_5295
Flavin reductase.
  
 0.654
RMCC_6122
Nitroreductase.
  
 
  0.618
RMCC_4251
Two-component sensor histidine kinase.
       0.601
RMCC_4250
Thioredoxin reductase.
       0.543
RMCC_4832
Monooxygenase; Belongs to the globin family.
 
 
 0.528
RMCC_4255
acyl-CoA dehydrogenase.
  
 
  0.523
RMCC_1145
Thioredoxin; Belongs to the thioredoxin family.
   
    0.517
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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