STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4280Prepilin-type N-terminal cleavage/methylation do main-containing protein, precursor. (556 aa)    
Predicted Functional Partners:
atpH
ATP synthase subunit H; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family.
  
  
  0.679
RMCC_6388
Uncharacterized protein.
  
     0.579
RMCC_4887
Hypothetical telomeric SfiI 20 protein 3.
  
     0.571
RMCC_4056
Uncharacterized protein.
  
     0.503
RMCC_4281
O-methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
       0.439
RMCC_4282
O-methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
       0.439
RMCC_1896
Uncharacterized protein.
  
     0.412
RMCC_4283
S-adenosyl-L-methionine-dependent methyl transferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
       0.406
RMCC_4284
Hypothetical protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
       0.406
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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