STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4285Protease IV sppA. (594 aa)    
Predicted Functional Partners:
RMCC_4286
Luciferase-like protein.
       0.635
nadK
Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
    
  0.627
RMCC_5956
Transmembrane protein.
  
    0.502
nudC
NADH pyrophosphatase.
    
  0.500
RMCC_4144
enoyl-CoA hydratase.
      
 0.495
RMCC_6073
RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family.
   
  
 0.462
RMCC_3194
Flavin-containing monoamine oxidase aofH.
      
 0.445
RMCC_4927
Transmembrane protein of unknown function.
      
 0.445
RMCC_3624
Conserved exported protein of unknown function.
  
     0.419
RMCC_0287
1-acylglycerol-3-phosphate o-acyltransferase.
  
  
 0.406
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.