STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4306Putative uncharacterized protein. (152 aa)    
Predicted Functional Partners:
RMCC_4305
Coenzyme PQQ synthesis protein C.
 
    0.849
RMCC_6227
Propanediol dehydratase medium subunit.
 
  
 0.819
RMCC_6228
Propanediol dehydratase large subunit.
 
  
 0.799
RMCC_4836
Glycerol dehydratase large subunit.
 
  
 0.797
RMCC_6229
Propanediol dehydratase small subunit.
 
   
 0.790
RMCC_6226
Diol/glycerol dehydratase reactivating factor large subunit.
 
  
 0.784
RMCC_4835
Dehydratase, small subunit.
 
   
 0.775
RMCC_6225
Dehydratase.
 
    0.760
RMCC_4834
Diol dehydratase reactivation protein.
  
     0.745
RMCC_4307
Transcriptional regulator CdaR.
 
     0.550
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.