Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCC_4331Dehydrogenase, Rv0697 family. (459 aa)    
Predicted Functional Partners:
RMCC_4332
Mycofactocin system glycosyltransferase.
  
    0.955
RMCC_4333
Creatinine amidohydrolase family protein, mycofactocin system.
       0.883
RMCC_0273
Ubiquinol-cytochrome C reductase qcrC.
   
  0.736
RMCC_2052
Uncharacterized protein.
    
  0.719
RMCC_3883
Oxidoreductase subunit alpha.
     
  0.638
RMCC_4383
enoyl-CoA hydratase echA9.
     
  0.616
RMCC_5208
Flavodoxin reductase family protein.
    
 0.609
RMCC_0024
Oxidoreductase.
    
 0.606
RMCC_1653
Hemoglobine-related protein hmp.
    
 0.606
RMCC_3929
Ferredoxin.
    
 0.606
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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