Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4366Hypothetical protein. (85 aa)    
Predicted Functional Partners:
RMCC_4365
Thioredoxin domain protein.
       0.883
mca
Mycothiol conjugate amidase mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.
       0.883
RMCC_4368
Conserved membrane protein of unknown function.
 
     0.863
RMCC_4364
NTF2 domain-containing protein.
       0.805
RMCC_5357
RNA polymerase sigma-70 factor.
  
     0.770
RMCC_4799
Putative uncharacterized protein.
  
     0.765
RMCC_4341
Uncharacterized protein.
  
     0.762
RMCC_3399
Integral membrane protein.
  
     0.753
RMCC_3517
Transmembrane protein.
  
     0.748
RMCC_5344
DivIVA domain-containing protein.
  
     0.748
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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