STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4397Uncharacterized protein. (113 aa)    
Predicted Functional Partners:
RMCC_4398
Lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
       0.737
RMCC_4396
Transmembrane serine/threonine-protein kinase E pknE.
       0.529
RMCC_2007
Uncharacterized protein.
      
 0.459
RMCC_2095
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase.
      
 0.459
RMCC_6178
Uncharacterized protein.
      
 0.459
RMCC_6313
Uncharacterized protein.
      
 0.459
RMCC_0965
Uncharacterized protein.
      
 0.455
RMCC_4395
DNA-binding transcriptional activator.
       0.404
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.