STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4495Pyridoxamine 5'-phosphate oxidase-like protein. (281 aa)    
Predicted Functional Partners:
pyrE-2
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.709
RMCC_4496
Uncharacterized protein.
       0.560
RMCC_0644
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
    0.547
RMCC_1041
Fe3+-siderophores ABC transporter substrate-binding protein.
  
    0.547
RMCC_1042
ABC transporter periplasmic solute-binding protein.
  
    0.547
RMCC_1950
ABC transporter substrate-binding protein.
  
    0.547
RMCC_2041
FEIII-dicitrate-binding periplasmic lipoprotein FecB.
  
    0.547
RMCC_0460
High-affinity Fe2+/Pb2+ permease.
   
    0.527
RMCC_3219
Uncharacterized protein.
   
    0.527
RMCC_3358
Metal-dependent hydrolase-like protein.
  
     0.526
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.