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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
RMCC_4530Alpha/beta hydrolase. (273 aa)    
Predicted Functional Partners:
menD
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.
  
 
  0.948
RMCC_4531
Isonitrile hydratase, ThiJ/PfpI family protein.
       0.880
pks5-2
Polyketide synthase pks5.
  
 0.858
RMCC_6601
Beta-ketoacyl synthase.
  
 0.858
RMCC_4533
O-succinylbenzoate synthase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
    
  0.838
RMCC_4528
Transmembrane protein.
 
     0.830
RMCC_6372
Polyketide synthase pks13.
  
 0.708
RMCC_3195
Non-heme haloperoxidase hpx.
  
     0.704
RMCC_1013
Polyketide synthetase mbtD.
  
 0.690
RMCC_0357
O-succinylbenzoate-CoA synthase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
    
  0.668
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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