STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4571Protein of unknown function. (105 aa)    
Predicted Functional Partners:
RMCC_4569
Uncharacterized protein.
 
     0.826
RMCC_4570
Inorganic phosphate transporter.
 
     0.812
RMCC_4572
O-succinylbenzoic acid-CoA ligase menE.
       0.787
RMCC_4573
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein.
       0.595
RMCC_6701
Protein of unknown function.
  
     0.542
RMCC_4568
Protein of unknown function.
 
    
0.496
RMCC_6700
Hypothetical protein.
  
     0.469
RMCC_2606
Uncharacterized protein.
  
     0.436
RMCC_2053
Pyrrolo-quinoline quinone.
  
     0.433
RMCC_5249
Uncharacterized protein.
  
     0.429
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.