STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4583Deazaflavin-dependent nitroreductase family protein. (137 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase (NADPH/NADH) large chain.
    
 0.732
RMCC_6293
Ferredoxin-dependent glutamate synthase [NADPH] large subunit gltB.
    
 0.732
RMCC_2059
Electron transfer flavoprotein beta subunit fixA.
  
 
 0.699
RMCC_2060
Electron transfer flavoprotein alpha subunit fixB.
   
 
 0.661
RMCC_4582
Uncharacterized protein.
       0.634
RMCC_6350
Nitrile hydratase subunit beta.
  
     0.601
RMCC_1290
NADH:flavin oxidoreductase.
 
   
  0.579
RMCC_3300
acetyl-CoA carboxylase beta chain.
    
  0.570
RMCC_5672
acetyl-CoA carboxylase carboxyl transferase beta subunit accD3.
    
  0.570
RMCC_1678
Transcription factor.
   
    0.569
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.