STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4594Cytochrome c assembly protein. (326 aa)    
Predicted Functional Partners:
RMCC_4595
Transmembrane protein.
 
  
 0.987
RMCC_4596
Cytochrome c biogenesis protein transmembrane region.
 
  
 0.973
RMCC_4597
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
 
  
 0.955
hemL
Glutamate-1-semialdehyde aminotransferase.
 
  
 0.947
RMCC_3444
Transmembrane protein.
 
  
 0.938
RMCC_0112
Transmembrane protein.
 
  
 0.935
RMCC_4598
Phosphoglycerate mutase.
  
    0.900
RMCC_0111
Cytochrome c biogenesis protein transmembrane region.
 
  
 0.885
RMCC_4619
uroporphyrin-III C-methyltransferase hemD.
 
 
  0.877
RMCC_6584
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
 
  
 0.847
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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