STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4609Ethanolamine ammonia-lyase light subunit; Belongs to the EutC family. (254 aa)    
Predicted Functional Partners:
RMCC_4610
Ethanolamine ammonia-lyase heavy chain.
 
 0.997
RMCC_4892
Ethanolamine ammonia lyase large subunit.
 
 0.988
RMCC_4607
NAD-dependent aldehyde dehydrogenase.
  
 
 0.783
RMCC_4608
Pyridoxamine 5'-phosphate oxidase.
       0.768
RMCC_4606
Uncharacterized protein.
       0.625
RMCC_4611
TetR family transcriptional regulator.
       0.603
RMCC_4612
Uncharacterized protein.
       0.603
RMCC_4891
Ethanolamine permease.
 
  
 0.568
RMCC_4613
Uncharacterized protein.
       0.451
RMCC_0695
Uncharacterized protein.
    
 0.446
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.