STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4646Protein of unknown function. (131 aa)    
Predicted Functional Partners:
RMCC_4647
Transmembrane protein.
       0.876
RMCC_4648
Iron-regulated heparin binding hemagglutinin hbhA.
 
   
 0.820
RMCC_2905
Competence damage-inducible protein A; Belongs to the CinA family.
  
  
 0.663
RMCC_3316
Type VII secretion protein EccB, Actinobacterial.
  
  0.662
RMCC_4649
XRE family transcriptional regulator.
  
    0.655
guaB
Inosine-5-monophosphate dehydrogenase guaB2; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.602
RMCC_2867
Hypothetical protein.
  
     0.589
RMCC_3568
Hypothetical protein.
  
  0.584
RMCC_0869
Cellulase celA1; Belongs to the glycosyl hydrolase family 6.
 
  
 0.579
RMCC_2436
Phage major capsid protein, HK97.
   
   0.576
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.