Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4698Uncharacterized protein. (415 aa)    
Predicted Functional Partners:
RMCC_6372
Polyketide synthase pks13.
 
 
 0.950
RMCC_1957
Peptide synthetase.
  
 0.929
RMCC_1016
Phenyloxazoline synthase mbtB.
  
 0.926
RMCC_2520
Fatty acyl-CoA synthetase.
 
 
 0.918
RMCC_1529
Oxidoreductase.
 
 
  0.830
RMCC_6782
Thioester reductase-like protein.
 
 
  0.811
RMCC_6783
fatty-acid-CoA ligase FadD9.
 
 
  0.806
mbtB
Phenyloxazoline synthase MbtB/ thioesterase.
  
 
 0.712
RMCC_4699
Unspecific monooxygenase; Belongs to the cytochrome P450 family.
  
    0.709
RMCC_6162
Short chain dehydrogenase.
  
 
 0.708
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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