STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4700Glycosyl transferase family 28. (427 aa)    
Predicted Functional Partners:
RMCC_4704
Male sterility domain protein.
 
     0.785
RMCC_4706
AMP-dependent synthetase and ligase.
 
     0.784
RMCC_4705
Phosphopantetheine-binding protein.
  
    0.755
RMCC_4701
UbiA prenyltransferase.
       0.746
RMCC_4702
A-factor biosynthesis protein AfsA-like protein.
       0.746
RMCC_4703
Nucleoside diphosphate kinase; Belongs to the NDK family.
       0.746
RMCC_4707
Pyruvate, water dikinase.
       0.746
RMCC_1493
Cytochrome P450 51 cyp51.
  
  0.573
RMCC_0841
Unspecific monooxygenase.
  
  0.568
RMCC_4699
Unspecific monooxygenase; Belongs to the cytochrome P450 family.
  
  0.566
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.