STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4745Isoprenylcysteine carboxyl methyltransferase. (169 aa)    
Predicted Functional Partners:
RMCC_4746
Chalcone/stilbene synthase.
 
  
 0.991
RMCC_4744
Monooxygenase, FAD-binding protein.
 
  
 0.985
RMCC_4747
Aminopeptidase Y.
       0.514
RMCC_4748
Lipoprotein aminopeptidase lpqL.
       0.510
RMCC_4214
Arsenical-resistance protein.
      
 0.493
RMCC_4749
Putative ABC transporter membrane protein, precursor.
       0.425
RMCC_4750
Multidrug ABC transporter ATPase.
       0.425
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
       0.411
RMCC_4752
Sulfur carrier protein ThiS.
       0.411
RMCC_4753
Thiamine biosynthesis oxidoreductase thiO.
       0.411
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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