STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4747Aminopeptidase Y. (465 aa)    
Predicted Functional Partners:
RMCC_4748
Lipoprotein aminopeptidase lpqL.
 
    
0.895
RMCC_4750
Multidrug ABC transporter ATPase.
       0.731
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
       0.731
RMCC_4752
Sulfur carrier protein ThiS.
       0.731
RMCC_4753
Thiamine biosynthesis oxidoreductase thiO.
       0.731
RMCC_4749
Putative ABC transporter membrane protein, precursor.
       0.730
RMCC_0515
Carboxylesterase, type B.
  
 0.629
RMCC_0700
Type B carboxylesterase; Belongs to the type-B carboxylesterase/lipase family.
  
 0.629
RMCC_2784
Para-nitrobenzyl esterase; Belongs to the type-B carboxylesterase/lipase family.
  
 0.629
RMCC_2969
Type B carboxylesterase; Belongs to the type-B carboxylesterase/lipase family.
  
 0.629
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.