STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4772F420-dependent methylene-tetrahydromethanopterin reductase. (369 aa)    
Predicted Functional Partners:
RMCC_4771
Uncharacterized protein.
       0.813
RMCC_5493
Fmnh2-utilizing oxygenase.
 
     0.678
RMCC_5295
Flavin reductase.
 
  0.601
RMCC_4773
Guanyl-specific ribonuclease Sa.
       0.540
RMCC_1999
NADPH-dependent FMN reductase.
  
  0.531
RMCC_6680
Transmembrane protein.
       0.522
RMCC_6484
caiB/BaiF family protein.
  
 
  0.503
RMCC_5234
Luciferase family protein.
  
    0.501
RMCC_6042
Flavodoxin oxidoreductase.
  
  
 0.467
RMCC_6021
Flavodoxin-like protein.
  
  
  0.456
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.