STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4844Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component. (380 aa)    
Predicted Functional Partners:
RMCC_3640
2-oxoglutarate dehydrogenase, E1 component.
  
 0.996
RMCC_5389
Alpha-ketoglutarate decarboxylase.
  
 0.996
RMCC_0947
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.949
RMCC_3987
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component.
  0.948
RMCC_5225
Dihydrolipoamide acyltransferase.
 
 0.945
RMCC_3988
Pyruvate dehydrogenase E1 component beta subunit pdhB.
 
 0.944
RMCC_0948
Catalytic domain of components of various dehydr ogenase complexes.
  0.942
sucB
2-oxoglutarate dehydrogenase E2 component.
 0.924
RMCC_3989
Pyruvate dehydrogenase E1 component alpha subunit pdhA.
 
 
 0.852
RMCC_0946
Pyruvate dehydrogenase.
 
 
 0.850
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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