STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4877Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (826 aa)    
Predicted Functional Partners:
RMCC_4876
Molecular chaperone.
 
     0.888
RMCC_4395
DNA-binding transcriptional activator.
  
    0.876
RMCC_4873
Isoniazid inductible gene protein iniA.
 
     0.827
RMCC_4872
Isoniazid inductible gene protein iniC.
 
     0.823
RMCC_3995
TetR family transcriptional regulator.
  
    0.798
RMCC_1998
Transcriptional regulatory protein.
  
    0.791
RMCC_1311
TetR family transcriptional regulator.
  
    0.790
RMCC_0497
Transcriptional regulatory protein kdpE.
   
  0.785
RMCC_3336
Chromosome replication initiation inhibitor protein; Belongs to the LysR transcriptional regulatory family.
  
    0.784
RMCC_4120
Transcriptional regulator.
   
    0.765
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.