Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RMCC_1916 | RMCC_3883 | RMCC_1916 | RMCC_3883 | Phosphotransferase system HPr (HPr) family protein; Belongs to the PEP-utilizing enzyme family. | Oxidoreductase subunit alpha. | 0.808 |
RMCC_1916 | RMCC_4760 | RMCC_1916 | RMCC_4760 | Phosphotransferase system HPr (HPr) family protein; Belongs to the PEP-utilizing enzyme family. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.594 |
RMCC_1916 | RMCC_4878 | RMCC_1916 | RMCC_4878 | Phosphotransferase system HPr (HPr) family protein; Belongs to the PEP-utilizing enzyme family. | Iron-sulfur-binding reductase. | 0.762 |
RMCC_2496 | RMCC_3883 | RMCC_2496 | RMCC_3883 | Fatty acid synthase. | Oxidoreductase subunit alpha. | 0.937 |
RMCC_2496 | RMCC_4760 | RMCC_2496 | RMCC_4760 | Fatty acid synthase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.871 |
RMCC_2496 | RMCC_4878 | RMCC_2496 | RMCC_4878 | Fatty acid synthase. | Iron-sulfur-binding reductase. | 0.865 |
RMCC_3883 | RMCC_1916 | RMCC_3883 | RMCC_1916 | Oxidoreductase subunit alpha. | Phosphotransferase system HPr (HPr) family protein; Belongs to the PEP-utilizing enzyme family. | 0.808 |
RMCC_3883 | RMCC_2496 | RMCC_3883 | RMCC_2496 | Oxidoreductase subunit alpha. | Fatty acid synthase. | 0.937 |
RMCC_3883 | RMCC_4760 | RMCC_3883 | RMCC_4760 | Oxidoreductase subunit alpha. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.991 |
RMCC_3883 | RMCC_4878 | RMCC_3883 | RMCC_4878 | Oxidoreductase subunit alpha. | Iron-sulfur-binding reductase. | 0.815 |
RMCC_3883 | RMCC_5474 | RMCC_3883 | RMCC_5474 | Oxidoreductase subunit alpha. | Iron-sulfur cluster binding protein. | 0.900 |
RMCC_3883 | RMCC_6068 | RMCC_3883 | RMCC_6068 | Oxidoreductase subunit alpha. | Succinate dehydrogenase iron-sulfur subunit. | 0.853 |
RMCC_3883 | RMCC_6293 | RMCC_3883 | RMCC_6293 | Oxidoreductase subunit alpha. | Ferredoxin-dependent glutamate synthase [NADPH] large subunit gltB. | 0.972 |
RMCC_3883 | gltB | RMCC_3883 | RMCC_0328 | Oxidoreductase subunit alpha. | Glutamate synthase (NADPH/NADH) large chain. | 0.972 |
RMCC_3883 | sdhB | RMCC_3883 | RMCC_0658 | Oxidoreductase subunit alpha. | Succinate dehydrogenase iron-sulfur protein. | 0.853 |
RMCC_4760 | RMCC_1916 | RMCC_4760 | RMCC_1916 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Phosphotransferase system HPr (HPr) family protein; Belongs to the PEP-utilizing enzyme family. | 0.594 |
RMCC_4760 | RMCC_2496 | RMCC_4760 | RMCC_2496 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Fatty acid synthase. | 0.871 |
RMCC_4760 | RMCC_3883 | RMCC_4760 | RMCC_3883 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Oxidoreductase subunit alpha. | 0.991 |
RMCC_4760 | RMCC_4878 | RMCC_4760 | RMCC_4878 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Iron-sulfur-binding reductase. | 0.776 |
RMCC_4760 | RMCC_5474 | RMCC_4760 | RMCC_5474 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Iron-sulfur cluster binding protein. | 0.863 |
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