Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCC_3307 | RMCC_3315 | Membrane protein. | Cell division protein FtsK. | 0.997 |
RMCC_3307 | RMCC_4223 | Membrane protein. | Cell division protein FtsK/SpoIIIE. | 0.865 |
RMCC_3307 | RMCC_4226 | Membrane protein. | Uncharacterized protein. | 0.611 |
RMCC_3307 | RMCC_4932 | Membrane protein. | Uncharacterized protein. | 0.766 |
RMCC_3307 | RMCC_4933 | Membrane protein. | DNA segregation ATPase FtsK/SpoIIIE. | 0.865 |
RMCC_3307 | RMCC_4935 | Membrane protein. | ESX-1 secretion system protein EccB1. | 0.511 |
RMCC_3315 | RMCC_3307 | Cell division protein FtsK. | Membrane protein. | 0.997 |
RMCC_3315 | RMCC_4226 | Cell division protein FtsK. | Uncharacterized protein. | 0.779 |
RMCC_3315 | RMCC_4931 | Cell division protein FtsK. | Protease; Belongs to the peptidase S8 family. | 0.704 |
RMCC_3315 | RMCC_4932 | Cell division protein FtsK. | Uncharacterized protein. | 0.751 |
RMCC_3315 | RMCC_4934 | Cell division protein FtsK. | ESX-4 secretion system protein EccD4. | 0.945 |
RMCC_3315 | RMCC_4935 | Cell division protein FtsK. | ESX-1 secretion system protein EccB1. | 0.703 |
RMCC_3315 | RMCC_4936 | Cell division protein FtsK. | ESX-2 secretion system protein EccE2. | 0.486 |
RMCC_4223 | RMCC_3307 | Cell division protein FtsK/SpoIIIE. | Membrane protein. | 0.865 |
RMCC_4223 | RMCC_4226 | Cell division protein FtsK/SpoIIIE. | Uncharacterized protein. | 0.866 |
RMCC_4223 | RMCC_4931 | Cell division protein FtsK/SpoIIIE. | Protease; Belongs to the peptidase S8 family. | 0.960 |
RMCC_4223 | RMCC_4932 | Cell division protein FtsK/SpoIIIE. | Uncharacterized protein. | 0.820 |
RMCC_4223 | RMCC_4934 | Cell division protein FtsK/SpoIIIE. | ESX-4 secretion system protein EccD4. | 0.946 |
RMCC_4223 | RMCC_4935 | Cell division protein FtsK/SpoIIIE. | ESX-1 secretion system protein EccB1. | 0.805 |
RMCC_4223 | RMCC_4936 | Cell division protein FtsK/SpoIIIE. | ESX-2 secretion system protein EccE2. | 0.486 |
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