Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4941Uncharacterized protein. (446 aa)    
Predicted Functional Partners:
RMCC_4942
Uncharacterized protein.
       0.800
RMCC_4944
Uncharacterized protein.
  
  
 0.770
RMCC_4940
Uncharacterized protein.
       0.741
RMCC_4943
Uncharacterized protein.
    
  0.644
RMCC_4696
Peptidase M12A astacin.
   
  0.613
RMCC_4365
Thioredoxin domain protein.
    
   0.510
RMCC_4939
Type VII secretion AAA-ATPase EccA.
     
 0.491
RMCC_4938
Uncharacterized protein.
  
    0.474
RMCC_3749
Type VII secretion integral membrane protein Ecc D.
    
   0.458
RMCC_4934
ESX-4 secretion system protein EccD4.
    
   0.458
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.