STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_4948Uncharacterized protein. (749 aa)    
Predicted Functional Partners:
RMCC_4952
Uncharacterized protein.
 
     0.829
RMCC_4949
Uncharacterized protein.
       0.773
RMCC_4936
ESX-2 secretion system protein EccE2.
  
     0.750
RMCC_6388
Uncharacterized protein.
  
     0.748
RMCC_4934
ESX-4 secretion system protein EccD4.
  
     0.741
RMCC_0921
Uncharacterized protein.
  
     0.738
RMCC_0923
Uncharacterized protein.
  
     0.731
RMCC_0922
Uncharacterized protein.
  
     0.661
RMCC_4932
Uncharacterized protein.
  
     0.657
RMCC_3288
Uncharacterized protein.
  
     0.651
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.