Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RMCC_0066 | RMCC_3553 | RMCC_0066 | RMCC_3553 | ATP-dependent RNA helicase rhlE; Belongs to the DEAD box helicase family. | spoIIIJ-associated protein. | 0.408 |
| RMCC_0066 | RMCC_5002 | RMCC_0066 | RMCC_5002 | ATP-dependent RNA helicase rhlE; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.706 |
| RMCC_0066 | eno | RMCC_0066 | RMCC_0462 | ATP-dependent RNA helicase rhlE; Belongs to the DEAD box helicase family. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.735 |
| RMCC_0066 | pnp | RMCC_0066 | RMCC_2284 | ATP-dependent RNA helicase rhlE; Belongs to the DEAD box helicase family. | Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.978 |
| RMCC_0352 | RMCC_5001 | RMCC_0352 | RMCC_5001 | Cell wall-associated hydrolases. | Conserved alanine and proline rich protein. | 0.657 |
| RMCC_0352 | RMCC_5002 | RMCC_0352 | RMCC_5002 | Cell wall-associated hydrolases. | Uncharacterized protein. | 0.719 |
| RMCC_1186 | RMCC_5002 | RMCC_1186 | RMCC_5002 | P-loop ATPase; Displays ATPase and GTPase activities. | Uncharacterized protein. | 0.864 |
| RMCC_2164 | RMCC_3553 | RMCC_2164 | RMCC_3553 | RNA-binding protein; Belongs to the UPF0109 family. | spoIIIJ-associated protein. | 0.974 |
| RMCC_2164 | RMCC_5002 | RMCC_2164 | RMCC_5002 | RNA-binding protein; Belongs to the UPF0109 family. | Uncharacterized protein. | 0.701 |
| RMCC_2164 | deaD | RMCC_2164 | RMCC_3649 | RNA-binding protein; Belongs to the UPF0109 family. | Cold-shock deaD-box protein A deaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.523 |
| RMCC_3553 | RMCC_0066 | RMCC_3553 | RMCC_0066 | spoIIIJ-associated protein. | ATP-dependent RNA helicase rhlE; Belongs to the DEAD box helicase family. | 0.408 |
| RMCC_3553 | RMCC_2164 | RMCC_3553 | RMCC_2164 | spoIIIJ-associated protein. | RNA-binding protein; Belongs to the UPF0109 family. | 0.974 |
| RMCC_3553 | RMCC_5002 | RMCC_3553 | RMCC_5002 | spoIIIJ-associated protein. | Uncharacterized protein. | 0.722 |
| RMCC_3553 | deaD | RMCC_3553 | RMCC_3649 | spoIIIJ-associated protein. | Cold-shock deaD-box protein A deaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.609 |
| RMCC_5001 | RMCC_0352 | RMCC_5001 | RMCC_0352 | Conserved alanine and proline rich protein. | Cell wall-associated hydrolases. | 0.657 |
| RMCC_5001 | RMCC_5002 | RMCC_5001 | RMCC_5002 | Conserved alanine and proline rich protein. | Uncharacterized protein. | 0.954 |
| RMCC_5002 | RMCC_0066 | RMCC_5002 | RMCC_0066 | Uncharacterized protein. | ATP-dependent RNA helicase rhlE; Belongs to the DEAD box helicase family. | 0.706 |
| RMCC_5002 | RMCC_0352 | RMCC_5002 | RMCC_0352 | Uncharacterized protein. | Cell wall-associated hydrolases. | 0.719 |
| RMCC_5002 | RMCC_1186 | RMCC_5002 | RMCC_1186 | Uncharacterized protein. | P-loop ATPase; Displays ATPase and GTPase activities. | 0.864 |
| RMCC_5002 | RMCC_2164 | RMCC_5002 | RMCC_2164 | Uncharacterized protein. | RNA-binding protein; Belongs to the UPF0109 family. | 0.701 |
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