STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_5007Dicarboxylate carrier protein. (464 aa)    
Predicted Functional Partners:
RMCC_5510
TRAP C4-dicarboxylate transporter permease DctM.
  
  
 0.693
RMCC_5006
Uncharacterized protein.
 
     0.667
dctA3
C4-dicarboxylate transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
  
 0.530
RMCC_4407
C4-dicarboxylate-transport transmembrane protein dctA; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
  
 0.525
RMCC_5008
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.496
RMCC_5507
Putative drug resistance efflux protein.
  
     0.458
RMCC_5511
Dimethylmenaquinone methyltransferase.
 
     0.455
RMCC_4710
Cation antiporter NADH dehydrogenase subunit.
  
  
 0.454
RMCC_3300
acetyl-CoA carboxylase beta chain.
 
   
 0.432
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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