Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RMCC_2998 | RMCC_5010 | RMCC_2998 | RMCC_5010 | ATP-dependent DNA helicase helY. | GTP-binding translation elongation factor typA. | 0.824 |
| RMCC_5010 | RMCC_2998 | RMCC_5010 | RMCC_2998 | GTP-binding translation elongation factor typA. | ATP-dependent DNA helicase helY. | 0.824 |
| RMCC_5010 | RMCC_5011 | RMCC_5010 | RMCC_5011 | GTP-binding translation elongation factor typA. | Lipoprotein lpqW. | 0.836 |
| RMCC_5010 | RMCC_5061 | RMCC_5010 | RMCC_5061 | GTP-binding translation elongation factor typA. | Translation initiation factor IF-3; Belongs to the IF-3 family. | 0.671 |
| RMCC_5010 | der | RMCC_5010 | RMCC_5700 | GTP-binding translation elongation factor typA. | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.787 |
| RMCC_5010 | guaA | RMCC_5010 | RMCC_6169 | GTP-binding translation elongation factor typA. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.742 |
| RMCC_5010 | pnp | RMCC_5010 | RMCC_2284 | GTP-binding translation elongation factor typA. | Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.658 |
| RMCC_5010 | rplA | RMCC_5010 | RMCC_4165 | GTP-binding translation elongation factor typA. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.761 |
| RMCC_5010 | rplD | RMCC_5010 | RMCC_4322 | GTP-binding translation elongation factor typA. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.685 |
| RMCC_5010 | rpsI | RMCC_5010 | RMCC_6221 | GTP-binding translation elongation factor typA. | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.660 |
| RMCC_5010 | rpsJ | RMCC_5010 | RMCC_4324 | GTP-binding translation elongation factor typA. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.685 |
| RMCC_5011 | RMCC_5010 | RMCC_5011 | RMCC_5010 | Lipoprotein lpqW. | GTP-binding translation elongation factor typA. | 0.836 |
| RMCC_5061 | RMCC_5010 | RMCC_5061 | RMCC_5010 | Translation initiation factor IF-3; Belongs to the IF-3 family. | GTP-binding translation elongation factor typA. | 0.671 |
| RMCC_5061 | der | RMCC_5061 | RMCC_5700 | Translation initiation factor IF-3; Belongs to the IF-3 family. | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.617 |
| RMCC_5061 | guaA | RMCC_5061 | RMCC_6169 | Translation initiation factor IF-3; Belongs to the IF-3 family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.459 |
| RMCC_5061 | rplA | RMCC_5061 | RMCC_4165 | Translation initiation factor IF-3; Belongs to the IF-3 family. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.934 |
| RMCC_5061 | rplD | RMCC_5061 | RMCC_4322 | Translation initiation factor IF-3; Belongs to the IF-3 family. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.895 |
| RMCC_5061 | rpsI | RMCC_5061 | RMCC_6221 | Translation initiation factor IF-3; Belongs to the IF-3 family. | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.965 |
| RMCC_5061 | rpsJ | RMCC_5061 | RMCC_4324 | Translation initiation factor IF-3; Belongs to the IF-3 family. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.975 |
| der | RMCC_5010 | RMCC_5700 | RMCC_5010 | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | GTP-binding translation elongation factor typA. | 0.787 |
page 1 of 4