Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RMCC_0746 | RMCC_1013 | RMCC_0746 | RMCC_1013 | Putative Zn-dependent alcohol dehydrogenase. | Polyketide synthetase mbtD. | 0.804 |
RMCC_0746 | RMCC_2496 | RMCC_0746 | RMCC_2496 | Putative Zn-dependent alcohol dehydrogenase. | Fatty acid synthase. | 0.719 |
RMCC_0746 | RMCC_3883 | RMCC_0746 | RMCC_3883 | Putative Zn-dependent alcohol dehydrogenase. | Oxidoreductase subunit alpha. | 0.577 |
RMCC_0746 | RMCC_4760 | RMCC_0746 | RMCC_4760 | Putative Zn-dependent alcohol dehydrogenase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.614 |
RMCC_0746 | RMCC_5027 | RMCC_0746 | RMCC_5027 | Putative Zn-dependent alcohol dehydrogenase. | Zinc-containing alcohol dehydrogenase superfamily protein. | 0.716 |
RMCC_0746 | RMCC_6372 | RMCC_0746 | RMCC_6372 | Putative Zn-dependent alcohol dehydrogenase. | Polyketide synthase pks13. | 0.799 |
RMCC_0746 | RMCC_6601 | RMCC_0746 | RMCC_6601 | Putative Zn-dependent alcohol dehydrogenase. | Beta-ketoacyl synthase. | 0.804 |
RMCC_0746 | RMCC_6769 | RMCC_0746 | RMCC_6769 | Putative Zn-dependent alcohol dehydrogenase. | PTS system D-fructose-specific IIABC component (F1P-forming), Frc family. | 0.733 |
RMCC_0746 | pks5-2 | RMCC_0746 | RMCC_1121 | Putative Zn-dependent alcohol dehydrogenase. | Polyketide synthase pks5. | 0.804 |
RMCC_1013 | RMCC_0746 | RMCC_1013 | RMCC_0746 | Polyketide synthetase mbtD. | Putative Zn-dependent alcohol dehydrogenase. | 0.804 |
RMCC_1013 | RMCC_2496 | RMCC_1013 | RMCC_2496 | Polyketide synthetase mbtD. | Fatty acid synthase. | 0.999 |
RMCC_1013 | RMCC_3883 | RMCC_1013 | RMCC_3883 | Polyketide synthetase mbtD. | Oxidoreductase subunit alpha. | 0.778 |
RMCC_1013 | RMCC_4760 | RMCC_1013 | RMCC_4760 | Polyketide synthetase mbtD. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.932 |
RMCC_1013 | RMCC_5027 | RMCC_1013 | RMCC_5027 | Polyketide synthetase mbtD. | Zinc-containing alcohol dehydrogenase superfamily protein. | 0.804 |
RMCC_1013 | RMCC_6372 | RMCC_1013 | RMCC_6372 | Polyketide synthetase mbtD. | Polyketide synthase pks13. | 0.997 |
RMCC_1013 | RMCC_6601 | RMCC_1013 | RMCC_6601 | Polyketide synthetase mbtD. | Beta-ketoacyl synthase. | 0.998 |
RMCC_1013 | RMCC_6769 | RMCC_1013 | RMCC_6769 | Polyketide synthetase mbtD. | PTS system D-fructose-specific IIABC component (F1P-forming), Frc family. | 0.725 |
RMCC_1013 | pks5-2 | RMCC_1013 | RMCC_1121 | Polyketide synthetase mbtD. | Polyketide synthase pks5. | 0.998 |
RMCC_2496 | RMCC_0746 | RMCC_2496 | RMCC_0746 | Fatty acid synthase. | Putative Zn-dependent alcohol dehydrogenase. | 0.719 |
RMCC_2496 | RMCC_1013 | RMCC_2496 | RMCC_1013 | Fatty acid synthase. | Polyketide synthetase mbtD. | 0.999 |
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