Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RMCC_5035Hypothetical protein; Belongs to the UPF0434 family. (71 aa)    
Predicted Functional Partners:
RMCC_5037
acyl-CoA synthetase.
 
    0.828
RMCC_5036
Putative uncharacterized protein.
       0.815
RMCC_1503
HIT family protein.
  
    0.791
RMCC_2396
Integral membrane protein.
  
     0.724
RMCC_4657
acyl-ACP thioesterase.
  
     0.684
RMCC_6370
Cutinase.
  
    0.678
RMCC_6365
Transmembrane protein.
 
     0.546
RMCC_2124
Integral membrane indolylacetylinositol arabinosyltransferase embB.
  
    0.538
RMCC_6385
Integral membrane indolylacetylinositol arabinosyltransferase embA.
  
    0.530
pheT
phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.515
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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