Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCC_1763 | RMCC_5179 | Site-specific recombinase, phage integrase famil y. | Uncharacterized protein. | 0.554 |
RMCC_1763 | RMCC_6578 | Site-specific recombinase, phage integrase famil y. | Uncharacterized protein. | 0.709 |
RMCC_3343 | RMCC_5179 | Rieske (2Fe-2S) domain-containing protein. | Uncharacterized protein. | 0.403 |
RMCC_4204 | RMCC_5179 | Peptidase M48, Ste24p. | Uncharacterized protein. | 0.431 |
RMCC_4738 | RMCC_5179 | Alpha/beta hydrolase superfamily enzyme, predicted hydrolase. | Uncharacterized protein. | 0.906 |
RMCC_5178 | RMCC_5179 | Ribosome-associated heat shock protein Hsp15. | Uncharacterized protein. | 0.458 |
RMCC_5179 | RMCC_1763 | Uncharacterized protein. | Site-specific recombinase, phage integrase famil y. | 0.554 |
RMCC_5179 | RMCC_3343 | Uncharacterized protein. | Rieske (2Fe-2S) domain-containing protein. | 0.403 |
RMCC_5179 | RMCC_4204 | Uncharacterized protein. | Peptidase M48, Ste24p. | 0.431 |
RMCC_5179 | RMCC_4738 | Uncharacterized protein. | Alpha/beta hydrolase superfamily enzyme, predicted hydrolase. | 0.906 |
RMCC_5179 | RMCC_5178 | Uncharacterized protein. | Ribosome-associated heat shock protein Hsp15. | 0.458 |
RMCC_5179 | RMCC_5180 | Uncharacterized protein. | Cutinase. | 0.498 |
RMCC_5179 | RMCC_5196 | Uncharacterized protein. | Zn-dependent hydrolase, including glyoxylase. | 0.417 |
RMCC_5179 | RMCC_5459 | Uncharacterized protein. | TetR family transcriptional regulator. | 0.422 |
RMCC_5179 | RMCC_6578 | Uncharacterized protein. | Uncharacterized protein. | 0.619 |
RMCC_5180 | RMCC_5179 | Cutinase. | Uncharacterized protein. | 0.498 |
RMCC_5196 | RMCC_5179 | Zn-dependent hydrolase, including glyoxylase. | Uncharacterized protein. | 0.417 |
RMCC_5459 | RMCC_5179 | TetR family transcriptional regulator. | Uncharacterized protein. | 0.422 |
RMCC_6578 | RMCC_1763 | Uncharacterized protein. | Site-specific recombinase, phage integrase famil y. | 0.709 |
RMCC_6578 | RMCC_5179 | Uncharacterized protein. | Uncharacterized protein. | 0.619 |