Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCC_5683 | RMCC_5684 | AAA-like domain protein. | Putative membrane protein. | 0.786 |
RMCC_5683 | RMCC_5685 | AAA-like domain protein. | CobQ/CobB/MinD/ParA nucleotide binding domain pr otein. | 0.563 |
RMCC_5683 | RMCC_5686 | AAA-like domain protein. | Uncharacterized protein. | 0.404 |
RMCC_5683 | RMCC_5687 | AAA-like domain protein. | Unnamed protein product. | 0.404 |
RMCC_5684 | RMCC_5683 | Putative membrane protein. | AAA-like domain protein. | 0.786 |
RMCC_5684 | RMCC_5685 | Putative membrane protein. | CobQ/CobB/MinD/ParA nucleotide binding domain pr otein. | 0.550 |
RMCC_5684 | RMCC_5686 | Putative membrane protein. | Uncharacterized protein. | 0.404 |
RMCC_5684 | RMCC_5687 | Putative membrane protein. | Unnamed protein product. | 0.404 |
RMCC_5685 | RMCC_5683 | CobQ/CobB/MinD/ParA nucleotide binding domain pr otein. | AAA-like domain protein. | 0.563 |
RMCC_5685 | RMCC_5684 | CobQ/CobB/MinD/ParA nucleotide binding domain pr otein. | Putative membrane protein. | 0.550 |
RMCC_5685 | RMCC_5686 | CobQ/CobB/MinD/ParA nucleotide binding domain pr otein. | Uncharacterized protein. | 0.550 |
RMCC_5685 | RMCC_5687 | CobQ/CobB/MinD/ParA nucleotide binding domain pr otein. | Unnamed protein product. | 0.550 |
RMCC_5686 | RMCC_5683 | Uncharacterized protein. | AAA-like domain protein. | 0.404 |
RMCC_5686 | RMCC_5684 | Uncharacterized protein. | Putative membrane protein. | 0.404 |
RMCC_5686 | RMCC_5685 | Uncharacterized protein. | CobQ/CobB/MinD/ParA nucleotide binding domain pr otein. | 0.550 |
RMCC_5686 | RMCC_5687 | Uncharacterized protein. | Unnamed protein product. | 0.773 |
RMCC_5687 | RMCC_5683 | Unnamed protein product. | AAA-like domain protein. | 0.404 |
RMCC_5687 | RMCC_5684 | Unnamed protein product. | Putative membrane protein. | 0.404 |
RMCC_5687 | RMCC_5685 | Unnamed protein product. | CobQ/CobB/MinD/ParA nucleotide binding domain pr otein. | 0.550 |
RMCC_5687 | RMCC_5686 | Unnamed protein product. | Uncharacterized protein. | 0.773 |