STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_6172Hydrolase. (248 aa)    
Predicted Functional Partners:
RMCC_6173
Glycosyl hydrolase.
 
 0.999
RMCC_0558
Trehalose-6-phosphate phosphatase otsB1.
 
 0.993
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.814
RMCC_0550
Uncharacterized protein.
  
    0.793
RMCC_6171
Dioxygenase.
     
 0.717
RMCC_6211
PTS system mannitol-specific transporter subunit IIC.
  
 
  0.712
RMCC_1658
HAD superfamily hydrolase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
    
 0.692
RMCC_2905
Competence damage-inducible protein A; Belongs to the CinA family.
    
  0.666
RMCC_2856
Alpha amylase.
 
 
 0.661
RMCC_1200
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
  0.645
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.