STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_6277Uncharacterized protein. (102 aa)    
Predicted Functional Partners:
RMCC_6278
NonF-like protein.
       0.777
RMCC_3901
dhnA-type fructose-1,6-bisphosphate aldolase-like enzyme.
  
 
 0.659
RMCC_5208
Flavodoxin reductase family protein.
 
 
  0.641
msrB
methionine-R-sulfoxide reductase.
       0.634
RMCC_0024
Oxidoreductase.
    
  0.558
RMCC_6042
Flavodoxin oxidoreductase.
    
  0.558
RMCC_6279
Lactoylglutathione lyase-like lyase.
  
    0.534
msrA
Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.532
RMCC_3206
Carbohydrate kinase; Belongs to the FGGY kinase family.
  
 
 0.441
xylB
Xylulokinase.
  
 
 0.441
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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