rpmB protein (Histophilus somni) - STRING interaction network

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rpmB

PFAM: ribosomal protein L28; KEGG: hso:HS_0145 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (78 aa)

Predicted Functional Partners:

rpmG

0.999

rplU

0.997

rpsF

0.997

rpmA

0.996

rpsT

0.996

rplM

0.996

rpmF

0.995

rpsR

0.995

rpsU

0.995

rpsL

0.995

Your Current Organism:

Histophilus somni

NCBI taxonomy Id: 228400
Other names: H. somni 2336, Haemophilus somnus 2336, Histophilus somni 2336, Histophilus somni str. 2336

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	HSM_1219	HSM_0118	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.997
rplM	rpmA	HSM_1219	HSM_0119	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein L27; KEGG: hso:HS_0246 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplM	rpmB	HSM_1219	HSM_0010	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein L28; KEGG: hso:HS_0145 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.996
rplM	rpmF	HSM_1219	HSM_0030	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: hso:HS_0163a 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.996
rplM	rpmG	HSM_1219	HSM_0011	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein L33; KEGG: hso:HS_0145a 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.996
rplM	rpsF	HSM_1219	HSM_0604	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.997
rplM	rpsL	HSM_1219	HSM_1809	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.998
rplM	rpsR	HSM_1219	HSM_0606	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.996
rplM	rpsT	HSM_1219	HSM_0741	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.994
rplM	rpsU	HSM_1219	HSM_0841	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S21; KEGG: msu:MS1762 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.988
rplU	rplM	HSM_0118	HSM_1219	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rplU	rpmA	HSM_0118	HSM_0119	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein L27; KEGG: hso:HS_0246 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplU	rpmB	HSM_0118	HSM_0010	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein L28; KEGG: hso:HS_0145 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplU	rpmF	HSM_0118	HSM_0030	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: hso:HS_0163a 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.993
rplU	rpmG	HSM_0118	HSM_0011	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein L33; KEGG: hso:HS_0145a 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.995
rplU	rpsF	HSM_0118	HSM_0604	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.992
rplU	rpsL	HSM_0118	HSM_1809	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.996
rplU	rpsR	HSM_0118	HSM_0606	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.991
rplU	rpsT	HSM_0118	HSM_0741	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.995
rplU	rpsU	HSM_0118	HSM_0841	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein S21; KEGG: msu:MS1762 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.991

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