STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSM_0497PFAM: NapC/NirT cytochrome c domain protein; KEGG: hso:HS_1504 cytochrome c-type protein. (203 aa)    
Predicted Functional Partners:
HSM_0496
Nitrate reductase cytochrome c-type subunit (NapB); Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
 
  
 0.977
napA
Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
 
 0.966
HSM_0495
TIGRFAM: ferredoxin-type protein, NapH/MauN family; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: hso:HS_1506 ferredoxin-type protein.
 
 
 0.961
HSM_0494
TIGRFAM: MauM/NapG family ferredoxin-type protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: hso:HS_1507 ferredoxin-type protein.
 
  
 0.949
napD
NapD family protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
 
  
 0.899
HSM_1835
TIGRFAM: trimethylamine-N-oxide reductase TorA; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: hso:HS_1673 trimethylamine-N-oxide reductase precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.679
HSM_1275
TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: hso:HS_0806 trimethylamine-N-oxide reductase 2, biotin sulfoxide reductase.
 
 
 0.651
HSM_1513
PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: hso:HS_1035 hemagglutinin antigen; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
  
 
 0.621
HSM_1375
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: hso:HS_0897 tetrathionate reductase, subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.618
HSM_0520
KEGG: hso:HS_1481 hypothetical protein.
  
   0.595
Your Current Organism:
Histophilus somni
NCBI taxonomy Id: 228400
Other names: H. somni 2336, Haemophilus somnus 2336, Histophilus somni 2336, Histophilus somni str. 2336
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