STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliQFlagellar biosynthetic protein fliQ; Identified by similarity to SP:P33134; match to protein family HMM PF01313. (87 aa)    
Predicted Functional Partners:
fliL
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.999
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.999
fliP
Flagellar biosynthetic protein FliP; Identified by similarity to SP:Q45980; match to protein family HMM PF00813.
 
 
 0.999
flgE
Flagellar hook protein FlgE; Identified by similarity to SP:P35806; match to protein family HMM PF00460; match to protein family HMM PF06429.
 
 
 0.999
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.999
HNE_0269
Putative flagellar protein; Identified by similarity to SP:P75934; match to protein family HMM PF00460; match to protein family HMM TIGR01395; match to protein family HMM TIGR01396.
 
 
 0.999
HNE_0270
Flagellar basal-body rod protein; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429; Belongs to the flagella basal body rod proteins family.
 
 
 0.999
HNE_0274
Flagellar biosynthetic protein FliR; Identified by similarity to SP:Q45975.
 
 
 0.999
HNE_0239
Conserved hypothetical protein; Identified by similarity to GB:AAS95392.1.
 
  
 0.998
HNE_0253
Putative chemotaxis MotA protein; Identified by similarity to SP:P55891.
 
  
 0.998
Your Current Organism:
Hyphomonas neptunium
NCBI taxonomy Id: 228405
Other names: H. neptunium ATCC 15444, Hyphomonas neptunium ATCC 15444, Hyphomonas neptunium str. ATCC 15444, Hyphomonas neptunium strain ATCC 15444
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.