Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| HNE_0098 | HNE_0336 | Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.500 |
| HNE_0098 | HNE_0578 | Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561. | tRNA synthetase class II core domain protein; Identified by match to protein family HMM PF00587. | 0.408 |
| HNE_0098 | HNE_3224 | Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561. | Conserved hypothetical protein; Identified by similarity to GB:AAK24167.1. | 0.418 |
| HNE_0334 | HNE_0335 | Hypothetical protein; Identified by Glimmer2; putative. | Acyltransferase domain protein; Identified by match to protein family HMM PF01553. | 0.727 |
| HNE_0334 | HNE_0336 | Hypothetical protein; Identified by Glimmer2; putative. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.537 |
| HNE_0335 | HNE_0334 | Acyltransferase domain protein; Identified by match to protein family HMM PF01553. | Hypothetical protein; Identified by Glimmer2; putative. | 0.727 |
| HNE_0335 | HNE_0336 | Acyltransferase domain protein; Identified by match to protein family HMM PF01553. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.575 |
| HNE_0336 | HNE_0098 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561. | 0.500 |
| HNE_0336 | HNE_0334 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Hypothetical protein; Identified by Glimmer2; putative. | 0.537 |
| HNE_0336 | HNE_0335 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Acyltransferase domain protein; Identified by match to protein family HMM PF01553. | 0.575 |
| HNE_0336 | HNE_0337 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Transporter, peptide-acetyl-coenzyme A transporter (PAT) family; Identified by similarity to SP:P36670; match to protein family HMM PF07690. | 0.501 |
| HNE_0336 | HNE_0578 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | tRNA synthetase class II core domain protein; Identified by match to protein family HMM PF00587. | 0.514 |
| HNE_0336 | HNE_0634 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Conserved hypothetical protein; Identified by similarity to GB:AAK25513.1. | 0.501 |
| HNE_0336 | HNE_0909 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Putative transcriptional regulatory protein. | 0.545 |
| HNE_0336 | HNE_3160 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Conserved hypothetical protein; Identified by similarity to GB:AAK25626.1. | 0.547 |
| HNE_0336 | HNE_3224 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Conserved hypothetical protein; Identified by similarity to GB:AAK24167.1. | 0.558 |
| HNE_0336 | HNE_3458 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Putative membrane protein. | 0.476 |
| HNE_0337 | HNE_0336 | Transporter, peptide-acetyl-coenzyme A transporter (PAT) family; Identified by similarity to SP:P36670; match to protein family HMM PF07690. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.501 |
| HNE_0578 | HNE_0098 | tRNA synthetase class II core domain protein; Identified by match to protein family HMM PF00587. | Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561. | 0.408 |
| HNE_0578 | HNE_0336 | tRNA synthetase class II core domain protein; Identified by match to protein family HMM PF00587. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.514 |
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