STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aqpZAquaporin Z; Identified by similarity to GB:BAB53131.1; match to protein family HMM PF00230; match to protein family HMM TIGR00861; Belongs to the MIP/aquaporin (TC 1.A.8) family. (226 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
 
 0.953
glpQ
Glycerophosphoryl diester phosphodiesterase; Identified by similarity to SP:P09394; match to protein family HMM PF03009.
  
 
 0.863
HNE_2237
Carbohydrate kinase, FGGY family; Identified by match to protein family HMM PF00069; match to protein family HMM PF00481.
    
 
 0.777
HNE_0398
Hypothetical protein; Identified by Glimmer2; putative.
   
 
 0.744
HNE_1317
EF hand domain protein.
   
 
 0.744
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 
 0.727
maeB
NADP-dependent malic enzyme; Identified by similarity to SP:O30808; match to protein family HMM PF00390; match to protein family HMM PF01515; match to protein family HMM PF03949.
  
 
 0.684
HNE_1276
Cyclic nucleotide-binding/patatin-like phospholipase domain protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF01734.
   
 0.554
HNE_1290
Cyclic nucleotide-binding protein; Identified by match to protein family HMM PF00027.
   
 0.543
HNE_1469
Cyclic nucleotide-binding protein; Identified by match to protein family HMM PF00027.
   
 0.543
Your Current Organism:
Hyphomonas neptunium
NCBI taxonomy Id: 228405
Other names: H. neptunium ATCC 15444, Hyphomonas neptunium ATCC 15444, Hyphomonas neptunium str. ATCC 15444, Hyphomonas neptunium strain ATCC 15444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.