Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HNE_0404 | HNE_1492 | HNE_0404 | HNE_1492 | Identified by match to protein family HMM PF01979; match to protein family HMM PF07969. | Identified by match to protein family HMM PF00753. | 0.433 |
HNE_1492 | HNE_0404 | HNE_1492 | HNE_0404 | Identified by match to protein family HMM PF00753. | Identified by match to protein family HMM PF01979; match to protein family HMM PF07969. | 0.433 |
HNE_1492 | HNE_1493 | HNE_1492 | HNE_1493 | Identified by match to protein family HMM PF00753. | Aryl-alcohol dehydrogenase; Identified by similarity to SP:P39849; match to protein family HMM PF00107. | 0.642 |
HNE_1492 | HNE_1494 | HNE_1492 | HNE_1494 | Identified by match to protein family HMM PF00753. | Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.435 |
HNE_1492 | HNE_2208 | HNE_1492 | HNE_2208 | Identified by match to protein family HMM PF00753. | Monooxygenase, FAD-binding; Identified by match to protein family HMM PF01494. | 0.433 |
HNE_1492 | HNE_3461 | HNE_1492 | HNE_3461 | Identified by match to protein family HMM PF00753. | Identified by match to protein family HMM PF00753. | 0.600 |
HNE_1492 | hppD | HNE_1492 | HNE_2900 | Identified by match to protein family HMM PF00753. | 4-hydroxyphenylpyruvate dioxygenase; Identified by similarity to SP:P80064; match to protein family HMM PF00903; match to protein family HMM TIGR01263. | 0.429 |
HNE_1493 | HNE_1492 | HNE_1493 | HNE_1492 | Aryl-alcohol dehydrogenase; Identified by similarity to SP:P39849; match to protein family HMM PF00107. | Identified by match to protein family HMM PF00753. | 0.642 |
HNE_1493 | HNE_1494 | HNE_1493 | HNE_1494 | Aryl-alcohol dehydrogenase; Identified by similarity to SP:P39849; match to protein family HMM PF00107. | Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.520 |
HNE_1494 | HNE_1492 | HNE_1494 | HNE_1492 | Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | Identified by match to protein family HMM PF00753. | 0.435 |
HNE_1494 | HNE_1493 | HNE_1494 | HNE_1493 | Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | Aryl-alcohol dehydrogenase; Identified by similarity to SP:P39849; match to protein family HMM PF00107. | 0.520 |
HNE_2208 | HNE_1492 | HNE_2208 | HNE_1492 | Monooxygenase, FAD-binding; Identified by match to protein family HMM PF01494. | Identified by match to protein family HMM PF00753. | 0.433 |
HNE_2208 | HNE_3461 | HNE_2208 | HNE_3461 | Monooxygenase, FAD-binding; Identified by match to protein family HMM PF01494. | Identified by match to protein family HMM PF00753. | 0.585 |
HNE_3461 | HNE_1492 | HNE_3461 | HNE_1492 | Identified by match to protein family HMM PF00753. | Identified by match to protein family HMM PF00753. | 0.600 |
HNE_3461 | HNE_2208 | HNE_3461 | HNE_2208 | Identified by match to protein family HMM PF00753. | Monooxygenase, FAD-binding; Identified by match to protein family HMM PF01494. | 0.585 |
hppD | HNE_1492 | HNE_2900 | HNE_1492 | 4-hydroxyphenylpyruvate dioxygenase; Identified by similarity to SP:P80064; match to protein family HMM PF00903; match to protein family HMM TIGR01263. | Identified by match to protein family HMM PF00753. | 0.429 |