STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNE_1915Conserved hypothetical protein. (178 aa)    
Predicted Functional Partners:
HNE_0127
Conserved hypothetical protein.
  
     0.699
HNE_1916
DSBA-like thioredoxin domain protein; Identified by match to protein family HMM PF01323.
       0.686
mutY
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.679
HNE_2240
Conserved hypothetical protein.
  
     0.654
HNE_0063
Conserved hypothetical protein.
  
     0.645
HNE_0634
Conserved hypothetical protein; Identified by similarity to GB:AAK25513.1.
  
     0.628
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.617
HNE_0728
Conserved hypothetical protein; Identified by similarity to GB:AAK22932.1.
  
     0.606
HNE_2707
Putative lipoprotein; Identified by similarity to GB:CAB45042.1.
  
    0.567
HNE_2241
Putative chain length determinant protein; Identified by match to protein family HMM PF02706.
  
     0.552
Your Current Organism:
Hyphomonas neptunium
NCBI taxonomy Id: 228405
Other names: H. neptunium ATCC 15444, Hyphomonas neptunium ATCC 15444, Hyphomonas neptunium str. ATCC 15444, Hyphomonas neptunium strain ATCC 15444
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.